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# Tabular Foundation Models

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  1. bioRxiv

    TabPFN 3.5 matches species distribution models without tuning, and fine-tuning makes it the benchmark's best single model

    Predicting where a species occurs from presence records alone has long relied on models such as MaxEnt that must be tuned for each dataset. On a standard benchmark of 225 species in six regions, TabPFN 3.5 reached a mean AUC of 0.732 without tuning, matching the best published five-model ensemble; fine-tuned on presence–background tasks from other regions it rose to 0.736, the best single model on the benchmark and significantly above MaxEnt's 0.728. The authors caution that six regions cannot establish the advantage in new regions, and that the model is sensitive to environmentally biased records.

  2. arXiv

    A whole table can become one vector: frozen tabular foundation models already carry dataset-level structure, and contrastive post-training makes retrieval robust

    Repurposing pretrained tabular foundation models as encoders of entire supervised datasets maps an unseen dataset to a fixed-dimensional vector in a single forward pass, reaching the strongest aggregate rank across six dataset-level tasks.

  3. arXiv

    Tabular foundation model rankings shuffle across benchmarks: on 160 classification and 81 regression datasets, accurate point predictions do not guarantee trustworthy intervals

    Across 160 classification and 81 regression datasets, tabular foundation model rankings change with the benchmark and the reliability metric, and regression models that already sit near nominal marginal coverage still under-cover in their worst feature slab, so model selection cannot rest on aggregate predictive accuracy alone.

  4. arXiv

    Tabular foundation models stop learning only sampled hard labels: mean rank improves across three architectures, with 62.1% of paired comparisons won

    Tabular foundation model pretraining has scored query predictions against sampled hard labels, so a fixed input keeps supervision from only one class and sampling variability stays in pretraining. GIST designs synthetic task generation and query supervision together: on tractable branches it averages over the conditional label distribution using generator states retained during synthesis, and an entropy budget calibrates the noise scale of the category encoding. Under matched pretraining schedules, TabICLv2, TabSwift and TabPFN-2.5 all improve mean rank on TabArena and TALENT without changing architecture or inference, winning 62.1% of paired dataset-level comparisons across these benchmarks and architectures against the corresponding hard-label controls.

  5. arXiv

    How Test-Time Compute Lifts Tabular Foundation Models: DiagScale Adaptation and Greedy Aggregation Give Consistent Gains, While Context Construction Depends on the Task

    This work systematically studies how test-time compute affects predictions of pretrained tabular foundation models along three axes—adaptation, aggregation, and context construction: it introduces DiagScale, a diagonal query-key similarity update training only 0.003-0.03% of parameters that matches full fine-tuning gains across three independently pretrained backbones; on a broader pool of 96 configurations, greedy selection reduces error by 2.4% relative to the default predictor while uniform averaging increases error; attention-guided retrieval improves TabPFN-3 on some large tables, whereas the context expansion methods tested yield no consistent improvement.

  6. arXiv

    Retro makes tabular foundation models refine predictions earlier and more broadly, reaching top-three overall Elo on TabArena, TALENT, and RelArena

    Tracing per-query predictive changes through TabICLv2, TabPFN-3, and EXAONE-Tabular, the authors find refinement is highly uneven across depth and often concentrated in later layers; they propose retrospective inference and build Retro, which uses Attention Residuals to adaptively reweight contributions from different depths and query-conditioned gated attention to modulate contextual updates element-wise, shifting refinement earlier and more broadly and reaching top-three overall Elo on TabArena, TALENT, and RelArena while lying on the performance-cost Pareto frontier.

  7. arXiv

    Distilling tabular foundation models into lightweight students: 57-98 Elo above tuned-and-ensembled baselines on TabArena and up to 21.6x inference speedup

    This work studies how to distill tabular foundation models (TFMs), whose in-context learning makes inference expensive, into lightweight dataset-specific students, and derives a recipe that uses the full labeled training set as teacher context and trains students solely on teacher predictions for observed and synthetic queries; on TabArena the resulting students outperform supervised tuned-and-ensembled counterparts by 57-98 Elo points, and applied unchanged to TALENT the recipe improves matched default students on 236-258 of 300 datasets while reducing median primary error by 4.0-6.4% and achieving median inference speedups of 3.0-21.6 times over their teachers.

  8. arXiv

    TabFM-Auto pairs an LLM agent with frozen TabFM to evolve data pipelines, lifting Elo from 1785 to 2013 across all 51 TabArena datasets

    TabFM-Auto pairs the frozen tabular foundation model TabFM with a language-model coding agent that iteratively rewrites four pipeline stages—data cleaning, feature engineering, context selection, and post-processing—guided by dataset metadata and validation feedback; across all 51 TabArena datasets five configurations take the top five overall positions, the best (Codex with Opus 5) raises TabFM from 1785.3 to 2013.0 Elo, the discovered pipelines transfer without further search to TabPFN-3, TabICLv2, and EXAONE-Tabular (+69 to +143 Elo), and TabFM-Auto ranks first overall among MLE agents on the 8 tabular competitions of MLE-Bench.

  9. arXiv

    Zhiheng Zhang's fluctuation-supervised pretraining (FSP) cuts macro RMSE by 7.0% versus S-learner across 24 nonlinear continuous-covariate cells and by 54.2% versus latent-effect supervision under effect shift

    The work introduces fluctuation-supervised pretraining (FSP), labeling each synthetic table by its average treatment effect plus its efficient influence-function fluctuation while deployment remains a frozen forward pass; the author proves an endpoint transition along the path Tλ,P=θ(P)+λP_nψ_P, where every fixed λ<1 retains label ambiguity of order (1-λ)2/n whereas full fluctuation makes the Gaussian label observable and reduces optimal finite-stratum causal label-prediction risk to order n-2; experiments show that across 24 nonlinear continuous-covariate cells at trained context lengths, continuous-row FSP lowers checkpoint-mean macro RMSE by 7.0% versus S-learner and wins all 12 weak-overlap cells, validation-selected Summary FSP deploys 11.

  10. In-Context Learning Meets Small Molecule Property Prediction: Benchmarking Novel Machine Learning Approaches

    This study comprehensively benchmarked tabular foundation models (TFMs) based on in-context learning for small organic molecule property prediction, comparing several TFMs with multiple machine learning methods across 11 data sets (regression, random and structure-aware splits, up to 10,000 molecules each), and found that TFMs consistently outperform XGBoost, CatBoost, multilayer perceptrons, and other descriptor-based methods even with careful hyperparameter selection for the baselines, achieve accuracy on par with or better than graph-based methods including those pretrained on chemical data, with Uni-Mol2 slightly outperforming TFMs in some experiments, while retrieval (selecting the 500 closest neighbors by Tanimoto similarity for each test molecule) yields further improvement on relat

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