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Journal of imaging informatics in medicine

FAR-POLYP-SEG: A Prospective Single-Center Colonoscopy Dataset for Colorectal Polyp Segmentation with Patient-Level Metadata and Baseline Cross-Dataset Evaluation

This work prospectively collected 8,181 frames from 455 patients during routine colonoscopy at Farhikhtegan Hospital, Tehran, Iran, between February and December 2025 (432 polyp-positive frames with expert pixel-level segmentation masks and 7,749 normal-mucosa frames), linked patient-level metadata (age, sex, colonoscopy indication, BBPS score, and procedure duration) to every case, and trained and evaluated six segmentation architectures under one standardized protocol with patient-grouped five-fold cross-validation, finding that PraNet reached the highest internal Dice (0.755) and nnU-Net the highest internal IoU (0.665) and pixel accuracy, yet gated false-positive rates on normal mucosa ranged from 24.9% (YOLOv11m-seg) to 59.